|Querying BGW with SPARQL|
This form lets you query the ontology-driven knowledge base through a SPARQL endpoint hosted by the Systems Biology group at the Norwegian University of Science and Technology ( NTNU ) . The underlying triple store contains close to 0.5 billon RDF triples of information.
Select a query and run it. Modify the parameters accordingly.
Alternatively, enter SPARQL code in the query box below.
Graphs with asserted triples only
|Last Updated on Wednesday, 08 January 2014 14:59|
Doctoral Degree for Aravind Venkatesan On 13th Feb 2014, Aravind Venkatesan successfully defended his Ph.D. thesis "Application of Semantic Web Technology to establish knowledge management and discovery in the Life Sciences" and was awarded the title of Doctor in Sciences by NTNU.
1. Local URIs replaced with external resolvable URIs
2. Data from SwissProt extended to UniProt
3. Data from IntAct added
4. Scope limited to 147 Reference Proteomes
5. Inferred triples limited to those supported explicitly by the ontology plus 'priority over is_a'
|Genes2GO: Gene Ontology matrix builder
Genes2GO builds a binary matrix with genes and GO IDs/Terms.
Cell Cycle Ontology v.2.01 and Gene Expression Knowledge Base V.1.01
Streamlined modelling of post-translational protein modifications which makes querying for modifications straightforward (e.g. query APO4)